vg::NetGraph Member List

This is the complete list of members for vg::NetGraph, including all inherited members.

add_chain_child(const Chain &chain)	vg::NetGraph	protected
add_unary_child(const Snarl *unary)	vg::NetGraph	protected
chain_end_rewrites	vg::NetGraph	protected
chain_ends_by_start	vg::NetGraph	protected
connectivity	vg::NetGraph	protected
end	vg::NetGraph	protected
flip(const handle_t &handle) const	vg::NetGraph	virtual
follow_edges_impl(const handle_t &handle, bool go_left, const function< bool(const handle_t &)> &iteratee) const	vg::NetGraph	virtual
for_each_handle_impl(const function< bool(const handle_t &)> &iteratee, bool parallel=false) const	vg::NetGraph	virtual
get_end() const	vg::NetGraph
get_handle(const id_t &node_id, bool is_reverse=false) const	vg::NetGraph	virtual
get_handle_from_inward_backing_handle(const handle_t &backing_handle) const	vg::NetGraph
get_id(const handle_t &handle) const	vg::NetGraph	virtual
get_inward_backing_handle(const handle_t &child_handle) const	vg::NetGraph
get_is_reverse(const handle_t &handle) const	vg::NetGraph	virtual
get_length(const handle_t &handle) const	vg::NetGraph	virtual
get_node_count() const	vg::NetGraph	virtual
get_sequence(const handle_t &handle) const	vg::NetGraph	virtual
get_start() const	vg::NetGraph
graph	vg::NetGraph	protected
has_node(id_t node_id) const	vg::NetGraph	virtual
is_child(const handle_t &handle) const	vg::NetGraph
max_node_id() const	vg::NetGraph	virtual
min_node_id() const	vg::NetGraph	virtual
NetGraph(const Visit &start, const Visit &end, const ChainContainer &child_chains_mixed, const HandleGraph *graph, bool use_internal_connectivity=false)	vg::NetGraph	inline
NetGraph(const Visit &start, const Visit &end, const ChainContainer &child_chains, const SnarlContainer &child_unary_snarls, const HandleGraph *graph, bool use_internal_connectivity=false)	vg::NetGraph	inline
NetGraph(const Visit &start, const Visit &end, const vector< vector< pair< Snarl, bool > > > &child_chains, const vector< Snarl > &child_unary_snarls, const HandleGraph *graph, bool use_internal_connectivity=false)	vg::NetGraph
NetGraph(const Visit &start, const Visit &end, const HandleGraph *graph, bool use_internal_connectivity=false)	vg::NetGraph	protected
start	vg::NetGraph	protected
unary_boundaries	vg::NetGraph	protected
use_internal_connectivity	vg::NetGraph	protected