map_main.cpp File Reference

#include "subcommand.hpp"
#include "../vg.hpp"
#include <xg.hpp>
#include "../utility.hpp"
#include "../mapper.hpp"
#include "../hts_alignment_emitter.hpp"
#include <vg/io/stream.hpp>
#include <vg/io/vpkg.hpp>
#include <bdsg/overlays/overlay_helper.hpp>
#include <unistd.h>
#include <getopt.h>
#include <chrono>

Functions
void	help_map (char **argv)
int	main_map (int argc, char **argv)

Function Documentation

help_map()

void help_map

(

char **

argv

)

main_map()

int main_map	(	int	argc,
		char **	argv )